# 安装包
if (!requireNamespace("data.table", quietly = TRUE)) {
install.packages("data.table")
}
if (!requireNamespace("jsonlite", quietly = TRUE)) {
install.packages("jsonlite")
}
if (!requireNamespace("ggpubr", quietly = TRUE)) {
install.packages("ggpubr")
}
if (!requireNamespace("ggthemes", quietly = TRUE)) {
install.packages("ggthemes")
}
# 加载包
library(data.table)
library(jsonlite)
library(ggpubr)
library(ggthemes)双分组小提琴图
注记
Hiplot 网站
本页面为 Hiplot Violin Group 插件的源码版本教程,您也可以使用 Hiplot 网站实现无代码绘图,更多信息请查看以下链接:
T检验分组数据的小提琴图和盒图。
环境配置
系统: Cross-platform (Linux/MacOS/Windows)
编程语言: R
依赖包:
data.table;jsonlite;ggpubr;ggthemes
sessioninfo::session_info("attached")─ Session info ───────────────────────────────────────────────────────────────
setting value
version R version 4.5.2 (2025-10-31)
os Ubuntu 24.04.3 LTS
system x86_64, linux-gnu
ui X11
language (EN)
collate C.UTF-8
ctype C.UTF-8
tz UTC
date 2026-01-28
pandoc 3.1.3 @ /usr/bin/ (via rmarkdown)
quarto 1.8.27 @ /usr/local/bin/quarto
─ Packages ───────────────────────────────────────────────────────────────────
package * version date (UTC) lib source
data.table * 1.18.0 2025-12-24 [1] RSPM
ggplot2 * 4.0.1 2025-11-14 [1] RSPM
ggpubr * 0.6.2 2025-10-17 [1] RSPM
ggthemes * 5.2.0 2025-11-30 [1] RSPM
jsonlite * 2.0.0 2025-03-27 [1] RSPM
[1] /home/runner/work/_temp/Library
[2] /opt/R/4.5.2/lib/R/site-library
[3] /opt/R/4.5.2/lib/R/library
* ── Packages attached to the search path.
──────────────────────────────────────────────────────────────────────────────
数据准备
- <1st col>:(数字)值数据
- <2nd col>:(String)第1列组
- <3rd col>:(字符串)第2列组
# 加载数据
data <- data.table::fread(jsonlite::read_json("https://hiplot.cn/ui/basic/violin-group/data.json")$exampleData$textarea[[1]])
data <- as.data.frame(data)
# 整理数据格式
data[, 3] <- factor(data[, 3], levels = unique(data[, 3]))
# 查看数据
head(data) Value Group1 Group2
1 4.2 low treat1
2 11.5 low treat1
3 7.3 low treat1
4 5.8 low treat1
5 6.4 low treat1
6 10.0 low treat1
可视化
# 双分组小提琴图
p <- ggviolin(data, x = "Group1", y = "Value", color = "Group2", add = "dotplot",
add.params = list(fill = "white",size = 1), title = "Violin Diagram",
xlab = "Group1", ylab = "Value", fill = "Group2",
palette = c("#374E55FF", "#DF8F44FF"), alpha = 0.5, trim = F) +
stat_compare_means(aes(group = data[, colnames(data)[3]]),
method = "t.test", vjust = -6, label.x.npc = "left", label.y.npc = "top",
tip.length = 0.03, bracket.size = 0.3, step.increase = 0, position = "identity",
na.rm = FALSE, show.legend = NA, inherit.aes = TRUE, geom = "text") +
theme_stata() +
theme(text = element_text(family = "Arial"),
plot.title = element_text(size = 12,hjust = 0.5),
axis.title = element_text(size = 12),
axis.text = element_text(size = 10),
axis.text.x = element_text(angle = 0, hjust = 0.5,vjust = 1),
legend.position = "right",
legend.direction = "vertical",
legend.title = element_text(size = 10),
legend.text = element_text(size = 10))
p
