Visualize CCLE Gene Expression
Usage
vis_ccle_tpm(
Gene = "TP53",
data_type = "mRNA",
use_log = FALSE,
opt_pancan = .opt_pancan
)
Arguments
- Gene
a molecular identifier (e.g., "TP53") or a formula specifying
genomic signature ("TP53 + 2 * KRAS - 1.3 * PTEN").
- data_type
support genomic profile for CCLE, currently "mRNA", "protein","cnv" are supported
- use_log
if TRUE, log values.
- opt_pancan
specify one dataset for some molercular profiles