Quick molecule analysis and report generation — mol_quick_analysis • UCSCXenaShiny

Quick molecule analysis and report generation

Usage

mol_quick_analysis(molecule, data_type, out_dir = ".", out_report = FALSE)

Arguments

molecule: a molecular identifier (e.g., "TP53") or a formula specifying genomic signature ("TP53 + 2 * KRAS - 1.3 * PTEN").
data_type: data type. Can be one of "mRNA", "transcript", "protein", "mutation", "cnv", "methylation", "miRNA".
out_dir: path to save analysis result and report, default is '.'
out_report: logical value wheather to generate html report

Value

a list.